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Flanking primers were designed using Primer3 [ 48]. 1. Name of locus 2. Scaffold, chromosome and inclusive base pairs of targeted sequences in Fusarium solani f. sp. pisi.
were extracted from GenBank (at the end of September 2013) using the key phrases "the name of locus" and "the name of species" in the annotations.
The three columns in each FISH-orthologue file were name of locus FISH-mapped in tammar wallaby, kb location of the orthologue of that locus in opossum/human, and opossum/human chromosome name.
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Note: The numbers and letters in the branches indicate the name of loci where the mutation occurred.
Mann-Whitney test p values are indicated under the name of the locus; a transparent pink box highlights loci showing statistical significance.
Additional file 1: DNA sequence name, sequence of locus-specific PCR primers, size and G/C content ratio of PCR amplicons, and type of DNA polymerase used for PCR amplification.
The name of the corresponding locus is BTH_I0680 (43,086 Da).
The names of marker loci used for the calculation are listed in Table S2.
The names of the loci and chromosomal location are indicated above each map.
The program input is a list of locus names (such as rs#), location, values of heterozygosity for both populations, and the FST value between the two populations.
Currently, POEAS accepts lists of gene names, locus names, or TAIR identifiers (IDs) as input data.
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