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We also demonstrate the high level of sensitivity and specificity in discovering simulated somatic mutations, for various combinations of a) genomic coverage and b) emulated heterogeneity.
We basically followed Webster et al. (2003) to estimate the per base pair rate of mutations for various GC content classes.
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Numerous pathogenic mutations responsible for various mitochondrial diseases have been identified in mtDNA-encoded tRNA genes [ 1], and in most cases, such disease-causative heteroplasmic mutations (i.e., wild-type mtDNA and mutant mtDNA co-exist within a cell) exhibit their intrinsic pathogenic thresholds.
This model argues that changes to mandibular and maxillary skeletal elements in mice mutant for various Dlx gene mutations, reflect a transformation of the upper and lower jaws due to a loss of signals from the 'caps' at the ends of the jaws to the 'hinges'hinges
Searching the 23 mutations by gene name in the COSMIC database, which contain somatic mutation information for various types of human cancer, shows nineteen genes being present in COSMIC, however the mutations were at different position; searching by exact positions shows the presence of the same mutations for KCTD8 and CACNB3.
The mutations for the various BJP in this study can be located throughout the protein, but they tend to cluster in certain areas of the variable domain [ 28].
These techniques have been successfully used to delineate fragment length as well gene mutations for characterizing various fungal and bacterial isolates (25 – 25 ).
The BOADICEA model predicted accurately the number of BRCA1 and BRCA2 mutations for the various groups of families, and was found to discriminate well at the individual level between carriers and noncarriers.
However, whereas large amounts of disease-associated mutation data for various genetic diseases have been reported, most of them are dispersed and stored locally.
However, because this is computationally expensive (keeping in mind that we perform correlated mutation analysis for various MADS domain proteins and various pairs of MADS domain proteins), we chose to use a cutoff on the value of the correlation coefficient, which we set to 0.4, in agreement with previous correlated mutation analyses [ 3].
We have recently developed a real-time PCR-based approach to rapidly screen for mutation of various genes including KRAS by using in-house developed Taqman probes that specifically recognize wild type and mutant alleles of each gene.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com