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Previously we found that the nonsense mutation triggered an increase in upf1 mRNA levels [34].
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Antibodies in the blood latched onto the standard Texas virus, but modified viruses carrying the F159S mutation triggered a much weaker effect.
In this study, we found that the nonsense mutation triggered a decrease in cwp1 and cwp2 mRNA levels and there was a reverse correlation between the expression levels of the cwp1/2 and upf1 mRNA.
When the genomic change was located in an encoding region, we used the Mitoanalyzer programme (http://www.cstl.nist) to determine whether the mutation triggered any amino acid change in the polypeptide sequence.
This analysis also shows that a third class of genes (clusters #2, 5, 8, 13, 14, 19) encompasses genes for which the bzip1-1 mutriggersriggers a new or hidden regulation.
These findings demonstrate that the bZIP1 mutation triggers a genome-wide de-regulation in response to L and/or N signals that range from i) a reduction of the L signal effect, to ii) unlocking gene regulation in response to L and N combinations.
Indeed, these results demonstrate that the bZIP1 mutation triggers a genome-wide deregulation in response to N and/or L signals that range from i) a lowering of the L signal effect, to ii) unlocking gene regulation in response to N and L combinations (discussed below).
Unexpected, all clusters in the second class of genes (clusters #3, 11, 15, 16, 18) share the property that the bzip1-1 mutriggersriggers a regulation of gene expression by the N or L signals that is inverse to the WT-sib response.
Epigenetic profiling of AML and glioma patient cohorts show that IDH mutations trigger a global DNA hypermethylation.
The problem of indirect effects is perhaps even more acute in vertebrates because ribosomal mutations trigger a p53-dependent nucleolar stress response pathway [ 3].
In 20 families with incomplete CSNB, Torben Beth-Halsen et al. [ 33] identified six different mutations that were all predicted to cause premature protein truncation and indicated that CACNA1F mutations trigger a novel mechanism of defective retinal neurotransmission in CSNB patients.
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