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RST was used to account for the mutational distances among alleles under the stepwise mutation model [ 42].
MtDNA sequences were assumed to mutate under the Hasegawa-Kishino-Yano (HKY) finite sites mutation model [ 43].
There is no useful mutation model, but the TOE is built up on useful effects of mutations".
In addition, problem-specific migration and mutation model are introduced to improve the effectiveness of the new algorithm.
This model is considered a more realistic microsatellite mutation model than the infinite allele model [93].
Provided microsatellites evolve under the stepwise mutation model [71], [72], mean d2 should reflect genetic distance between parental genomes.
Genetic distances among different-size normal alleles were calculated assuming a stepwise mutation model for D22S1140 and D22S1153 using RST.
We also applied pairwise RST, an F-statistic derived under a stepwise mutation model to the microsatellite data [45].
Subsequently, marker mutations are superimposed on the branches of the genealogy according to a specified mutation model (e.g. biallelic SNPs).
SMM: stepwise mutation model.
An infinite allele mutation model was assumed.
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