Sentence examples for mutation data from from inspiring English sources
In this paper, we introduce an algorithm for discovering mutated driver patterns de novo using somatic mutation data from biological datasets, which is based on recent exploration made by Vandin et al. [ 19] and Zhao et al. [ 21].
We developed a permutation-based framework to address this challenge, employing mutation data from intronic sequences to control for passenger mutational load on a per gene basis.
Using somatic mutation data from the exomes of a 361-tumor training set, we developed classifiers to determine MSI status based on four machine-learning frameworks.
Histologic or p16 mutation data from previous endoscopies from many of these patients were not available; because of this, data from the esophagectomy specimens was analyzed separately from that obtained from endoscopic biopsies.
Mutagrator is a software program which takes curated mutation data from the literature and displays it in the context of a master protein (chosen by the user) and a protein-registered TK multiple domain alignment.
The somatic mutation data from the 99 bladder cancers treated in China was reported previously [ 36].
The evaluations can be performed by both comparing and contrasting mutations data from different cancer types and/or from different studies.
In this study, we show novel DNA motifs that promote single nucleotide polymorphism (SNP) formation and are conserved among exons, introns, and intergenic DNA from mice (Sanger Mouse Genomes Project), human genes (1000 Genomes), and tumor-specific somatic mutations (data from TCGA).
Mutation data downloaded from the TCGA were excluded from the ICGC downloads.
Jones, D. T., Taylor, W. R. & Thornton, J. M. The rapid generation of mutation data matrices from protein sequences.
After applying this method to cancer gene mutation data generated from large-scale and whole genome sequencing of cancer samples, a network of cancer genes with co-occurring and anti-co-occurring mutations was constructed.
