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If an expression level was shared by multiple transcripts, the mean of ChIL-seq and ChIP read counts for the regions around the corresponding TSSs was used.
For genes with multiple transcripts, the longest one is selected for length calculation.
When genes had multiple transcripts, the longest one was used.
Where probes were annotated to multiple transcripts, the transcript with the longest 3'UTR sequence was selected.
For genes encoding multiple transcripts, the transcript with the longest genomic transcribed length was used in length distribution tests.
For Refseq genes with multiple transcripts the longest form was used, to capture any possible intragenic functions.
Similar(51)
On the cellular level, chromosomal region-specific demethylation may open for transcription of multiple transcripts from the same locus, which then could lead to the observed presence of multiple overlapping transcripts.
Of the multiple transcripts of the DIAPH3 locus, Isoform 1 mediated bleb formation, while an activated variant of Isoform 7 instead promoted filopodia.
The gene transcript annotation of the Nipponbare RefSeq was downloaded from the Rice Annotation Project64, and if a protein-coding gene contained multiple transcripts only the transcript with the longest open reading frame was selected as the representative for the gene.
The generation of proteome diversity from a rather limited number of genes is primarily due to alternative splicing and alternative promoter usage, the latter leading to multiple transcripts from the same gene with different transcription start sites (TSSs).
Because this conservation status was defined by genome position, the conservation status of a given sdSNP was determined uniquely even if multiple transcripts included the exon flanking the sdSNP (Processes 6 and 7 in Figure 2).
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