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To further assess the relationship between deafness and coat colour, we also considered a multiple trait analysis of these two categorical phenotypes.
Note that the CLAK-E ig algorithm is a generalization of the eigen-decomposition based algorithms published before (e.g. ) for a case of multiple trait analysis.
Our results agree with Schaeffer [ 21], in the sense that the capacity of a multiple trait analysis to increase CD depends on residual and genetic correlations used for the analysis.
The QTL regions were named using the trait initials if they were detected through single trait analysis or as "multi" if they were detected by multiple trait analysis, followed by their genetic position in bin (Fig. 2).
The estimates of heritability for deafness are roughly equivalent to those for the univariate analyses in Table 2. Similarly, there is no evidence in the multiple trait analysis for gender differences in the risk of hearing loss.
However, as the multiple trait analysis presented in Table 3 reveals, the association between coat colour and deafness appears to be less pronounced in the JRT than in the Dalmatian.
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Such selection bias can be reduced by using multiple-trait analysis [ 33].
In this study, we used this methodology to infer health status based on observed growth rates in salmon in a multiple-trait analysis.
In addition, multiple-trait analysis (MT-CIM) was used to analyze QTL over experiments, for detection of loci that consistently affected the phenotype across environments.
For this multiple-trait analysis, several groups of cases with different but related phenotypes are formed, each matched to its own control group.
Multiple-trait analysis of the clustered traits tended to work better than single-trait analysis of the principal component variables but seemed to be a compromise between single-trait analysis and multitrait analysis of all 16 traits.
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multiple model analysis
multiple trait animal
multiple resolution analysis
multiple trait model
multiple correspondence analysis
multiple trait optima
multiple imputation analysis
multiple sequence analysis
multiple trait methodology
multiple correlation analysis
multiple regression analysis
multiple trait strategy
multiple alignment analysis
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