Sentence examples for multiple species by from inspiring English sources

We determine orthology relationships among multiple species by applying OrthoMCL [ 58] using default parameters.

Furthermore, we achieve high coverage when considering multiple species, by using a relaxed definition of interologs, and by transferring function from PPI neighbors and from orthologous proteins.

Phylogenetic footprinting methods try to discover TFBS in a set of orthologous regulatory regions from multiple species, by identifying the best conserved motifs in those orthologous regions [ 7].

This extent of these deviations depends on the particle number, N, and its molecular brightness ε, and thus these parameters can be derived, for single or multiple species, by modelling the PCH curve [15].

The signal enhancement provided by the SERS substrate allows for collection of entire SERS spectra on the order of milliseconds, enabling selectivity between multiple species by distinguishing between the analyte in question and contaminants.

A possible next step in this community annotation effort could be the annotation of gene families across the genomes of multiple species by utilising the experience of experts in the field.

One explanation for this pattern is that the nuclear genomes of some species in this complex are mosaics of genes derived from multiple species generated by a complex history of recurrent introgressive hybridization followed by isolation and divergence [ 42].

The primary output from this step is a tab-separated text file listing the conversion observations for each combination of reference and outgroup species, which are grouped into unique events (since the same event may be observed in multiple species and/or by using multiple outgroups) and localized to a particular sub-lineage in the phylogenetic tree.

First, the epigenomic data from multiple species are presented side-by-side (Fig. 1, right).

MALS data are also consistent with multiple species as indicated by a broad peak eluting from the prior gel filtration chromatography column, with masses ranging from 267 kDa (peak2) to 332 kDa (peak1) (Fig. 1H).

KOG, OrthoMCL and TribeMCL assemble protein groups from multiple species – the former by merging 'triangles' of reciprocal best hits based on shared edges (followed by a variety of heuristic steps designed to improve sensitivity), while the latter two use a Markov clustering algorithm to form groups from a complex graph defined by pairwise sequence similarity scores.