Sentence examples for multiple similarity matrices from inspiring English sources

Multiple similarity matrices can be linearly combined, allowing SDs from multiple experiments to be combined.

To test the relationship between MSI and phylogenetic relatedness, multiple phylogenetic similarity matrices were constructed for all of the taxa examined, using recently published phylogenetic hypotheses [33] [43].

The software BMGE was applied on these multiple sequence alignments with three similarity matrices: BLOSUM30, BLOSUM62 and BLOSUM95.

We used a multiple Mantel test [44] with four similarity matrices to test this hypothesis.

For each MITE group, multiple alignments (including gapped positions) were created from which similarity matrices were calculated using BioEdit software, version 7.0.5.3 (http://www.mbio.ncsu.edu/BioEdit/bioedit.html).html

In practice, when inferring a particular gene tree, our opinion is to carefully examine the original multiple sequence alignment and those obtained by BMGE trimming with several similarity matrices (i.e. BLOSUM or PAM).

First, we integrate multiple data sources which are drug chemical structures, drug target proteins, and drug-disease associations to extract similarity matrices of drugs and diseases, respectively.

Similarity fusion involves searching using multiple similarity measures.

Triangular similarity matrices were calculated using the Bray-Curtis similarity coefficient.

Additional file 2: Four Drug Drug similarity matrices.

Cosine distance is used to establish two similarity matrices.