Sentence examples for multiple sequence sets from inspiring English sources

It is unbiased both in the sense of positional context and multiple sequence sets.

For multiple sequence sets, all possible pairwise alignments are performed and fragments contained in these pairwise alignments are integrated greedily into a resulting multiple alignment.

Starting with each taxon concatenated amino acid sequence, in turn, we generated 13 multiple sequence alignments sets using the tree obtained for one of the above windows with MrBayes.

These relationships were used to produce indices for all possible combinations of 3 sequences (recombinant/parents) from a multiple sequence data set.

The set also included randomized oligonucleotides and bacterial sequences as negative control and multiple sequenced of sets of house-keeping genes as positive control.

With the advent of increasingly reduced WGS costs, future comprehensive comparison studies will be conducted to compare all rare variant detection methods on multiple sequencing data sets with pedigrees structure.

The robustness of the grouping was determined by bootstrap re-sampling of multiple sequence alignments (100 sets) with the programs SEQBOOT, DNADIST, NEIGHBOR, and CONSENSE.

All the studies mentioned earlier require the construction of multiple sequence alignments from sets of homologous genes.

The robustness of the grouping was determined by bootstrap resampling of the multiple sequence alignments (1,000 sets) with the programs SEQBOOT, DNADIST, NEIGHBOR, and CONSENSE.

Multiple sequence alignments of SET-domain sequences were performed using the ClustalW program [ 69].

ProQM-resample was benchmarked on the independent EVfold_membrane data set (Hopf et al., 2012) consisting of 15 340 models for 25 targets generated with CNS (Brunger et al., 1998) using distance constraints from evolutionary couplings extracted from large multiple sequence alignments (the set is actually larger, but only 25 targets had a known structure).