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Usually, HMMTOP can achieve better performance in multiple sequence mode.
Set_160 is used to evaluate HMM_RA using multiple sequence mode.
HMM_RA can also run in single sequence mode and multiple sequence mode.
HMMTOP can make prediction in either single sequence mode or multiple sequence mode.
TMMTOP_RA work in either single sequence mode or multiple sequence mode.
When multiple sequence mode is used, HMM_RA outperforms HMMTOP by 3.5% in topology accuracy and 2.4% in location accuracy.
Similar(49)
For comparison of the primary structures of biomineralization proteins and their families and groups, the multiple sequence alignment mode "Align" was used, implemented through "ClustalW 2.0.12" (with the mode settings not configured).
The alignment-based mode requires a pregenerated multiple sequence alignment (MSA) of the orthologous promoters in a gene family.
23 Psiblast was used for the Multiple Sequence Alignment (MSA) generation method with three MSA generation iterations and a local alignment mode.
This is because the AB discovery mode imposes the additional constraint that words should appear aligned in the multiple sequence alignment.
Protein multiple sequence alignments were built with MAFFT, version 7 (Katoh and Standley 2013) with high accuracy mode (––genafpair ––maxiterate 1000).
More suggestions(14)
multiple sequence alignment
multiple interface mode
multiple reflection mode
multiple sequence comparison
multiple turnover mode
multiple regression mode
multiple tracking mode
multiple wave mode
multiple sequence processing
multiple track mode
multiple chassis mode
multiple stress mode
multiple scattering mode
multiple access mode
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