Sentence examples for multiple protein structures from inspiring English sources

The first one was developed to test JAMMING when multiple protein structures are being analyzed.

The approach can be extended to refine regions of high deviation obtained using simultaneous superposition of multiple protein structures.

In order to deal with the analysis of multiple protein structures, we describe an implementation that takes advantage of the multitask capacity embedded in Java™, that is, parallel processing and distributed computing [19] to give access to this software to the scientific community.

So, as a general approach, the researcher may choose first to identify critical residues based exclusively on a protein structure provided that the specificity of the method is quite good in that condition, and depending on the goal of the researcher it may be useful to run JAMMING using multiple protein structures.

The latter was also used for superimposing multiple protein structures.

To estimate side chain conformation variability among multiple protein structures, the RMSF of side chain residues was calculated.

An initial structure alignment containing the CIDs from 1ITX, 1D2K, and 1LG1 was generated with the online CE-MC - multiple protein structure alignment program [69].

Multiple relevant protein structures can be included in a single model and uploaded in PDB format Fig. 5 Web GUI: submit page.

These maps can then be mined to identify common patterns of residues in contact that occur in multiple different protein structures [ 5].

The reason for this is that the same bioisosteric fragment can be obtained from multiple different superimposed protein structures.

Prediction could be based on multiple ortholog sequences, protein structures, and annotation of variants.