Sentence examples for multiple phylogenetic methods from inspiring English sources

Here, using datasets with varying numbers of loci and multiple phylogenetic methods, we estimate a well-supported species tree for pseudoxyrhophiine snake genera that suggests a monophyletic radiation of these snakes on Madagascar.

Our findings are robust over multiple phylogenetic methods intended to counter LBA including: the removal of third positions, RY coding of first and third positions, the removal of out-groups and long branches, and the use of a conservative alignment (with fast evolving positions removed by the program Gblocks [ 49, 50, 52] (Table 2).

The 18S gene was used to resolve deep splits within the Enoplia and evaluate the branching order of major clades in the nematode tree; multiple phylogenetic methods and rigorous empirical tests were carried out to assess tree topologies under different parameters and combinations of taxa.

4) It is highly desirable to use multiple phylogenetic inference methods to validate evolutionary relationships.

In summary, the multiple molecular phylogenetic methods of analysis of syndecan protein sequences support the pairings of syndecan-1 with syndecan-3, and syndecan-2 with syndecan-4, and indicate that the invertebrate syndecans are distantly and equivalently related to the four vertebrate syndecans.

There is no consensus in the literature regarding the tolerance of phylogenetic methods to multiple substitutions [ 4, 5].

Our results are consistent with previous findings that suggest that k-tuple distance methods are more accurate than phylogenetic methods based on multiple sequence alignment.

Through the analysis of multiple loci under a variety of phylogenetic methods, we achieved one of our main goals of inferring a robust estimate of the cluster groupings among staphylococcal species.

We performed multiple phylogenetic analyses of these sequences with up-to-date phylogenetic methods.

This multiple sequence alignment enables the application of standard phylogenetic methods, which essentially treat reads as examples of full-length gene sequences with a great deal of missing data, as well as placement-type phylogenetic methods.

Step one estimates a multiple sequence alignment (MSA) and step two applies phylogenetic methods to ask evolutionary questions of that MSA.