Sentence examples for multiple paralogs in from inspiring English sources

For families with multiple paralogs in select species, additional trees were reconstructed using the BLOSUM30 and PAM models as well as the drawtree program of PHYLIP3.65 package (http://evolution.genetics.washington.edu/phylip/getme.html) [73].

Some families were represented by multiple paralogs in a given genome, and others by none; in addition, HMM sets within a family sometimes matched distinct but overlapping target sequences, yielding a total of 1,245 matching sequences.

Moreover, we observed that the majority of snoRNAs have multiple paralogs in the rhesus monkey genome.

Fourth, we identify 22 cases where one or two recent gene duplication events generated multiple paralogs in a species.

Most of these proteins are highly conserved, with some of them having multiple paralogs in budding and fission yeast.

As a second illustrative example, membrane alanyl aminopeptidase showed independent expansions into multiple paralogs in Eimeria and Sarcocystidae (Additional file 12).

The major cold-shock protein family CspA (and its homologs) (COG1278) is widespread in bacteria and eukaryotes, with multiple paralogs present in many organisms.

The genes encoding L-LDH have been used as a model for gene duplication due to the multiple paralogs found in eubacteria, archaebacteria, and eukaryotes.

Unlike the single fungal paralogs of Group 1 and Group 2, Group 3 and Group 4 septins duplicated and diverged, giving rise to multiple paralogs, especially in the ascomycetes.

It is reasonable to hypothesize that the bacterium has retained multiple paralogs involved in copper binding for more efficient uptake and regulation, while the copper resistance protein CopC in M. gilvum may enhance the survival of the bacterium under extreme copper stress, as is the case e.g. with the copper resistance protein PcoC in E. coli [ 46].

We also detected the multiple paralogs of SIR1 in S. kudriavzevii and S. bayanus, which function in transcriptional silencing in these species (Gallagher et al. 2009).