Sentence examples for multiple nucleotide alignment from inspiring English sources

Multiple nucleotide alignment of ITS region of the fungal strain and 17 strains belonged to the genus Aspergillus was carried out using the Clustal W program [17] from the MEGA version 4.0 [18].

For all of these cases, we aligned all of the homologs using the protein sequence with MUSCLE (Edgar 2004) and reverse-translated to create a multiple nucleotide alignment.

Multiple nucleotide alignments were built guided by previous alignments of amino acid sequences using Muscle [ 24] and Pal2Nal [ 25].

Multiple nucleotide sequence alignment and the alignment of the deduced amino acids of all of the gene segments were conducted by using ClustalW in BioEdit 7.09.0 (www.mbio.ncsu.edu/bioedit/bioedit.html).html

The extracted RT cores were subsequently analyzed using the Geneious Pro Alignment tool (Drummond et al. 2011) to generate a multiple nucleotide sequence alignment.

The multiple nucleotide sequence alignment was constructed manually based on the results of the amino acid sequence alignment.

Multiple nucleotide sequence alignment of gene was calculated and presented by using the DNAMAN program.

The strategy of this algorithm was designed to carefully select a set of common PCR primer pairs from the conserved regions by multiple nucleotide sequence alignment.

The multiple nucleotide sequence alignment was performed using the ClustalW algorithm implemented in MEGA5.2 software [ 29].

Database search and multiple nucleotide sequence alignment of both the variants showed their conservation across various species (Additional file 2).

Multiple nucleotide sequence alignment showed a 247-bp insertion in GhGDRP85 gene (Additional file 1 Figure S1).