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Results were adjusted for multiple hypotheses using the FDR for each functional group/pathway.
The p values were corrected for multiple hypotheses using FDR q values [39].
Significant enrichment of AE-associated genes (P<0.05; corrected for multiple hypotheses using FDR) was determined using the "gene module map method" implemented in Genomica [24].
After calculating the p-values for all 5 kbp windows, the p-values were corrected for multiple hypotheses using the FDR method [11].
We correct for multiple hypotheses using a Bonferroni correction.
aP-values are corrected for multiple hypotheses using Benjamini-Hochberg false discovery rate.
Similar(47)
Statistical comparison of the two experimental conditions was performed using the Wilcoxon test, and the obtained P-value was corrected for multiple hypotheses testing using the False Discovery Rate (FDR) method for array analysis.
Since multiple associations are taken into account and following the protocol described by Kuhn et al. [40], we addressed multiple hypotheses by using q-values calculated with the "qvalue" package in R [44] instead of raw p-values.
Results were adjusted for multiple hypotheses testing using the FDR for each functional group/pathway.
The p-values are corrected for multiple hypotheses testing using the false discovery rate procedure [33].
The p-values were computed under the binomial distribution and were adjusted for multiple hypotheses testing using the conservative Bonferroni correction.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com