Sentence examples for multiple genomes as from inspiring English sources

The variation and read depths of multiple genomes, as well as annotations, can be shown simultaneously at various scales.

Our goal was to create an efficient flexible way to search for anchors that meet arbitrary constraints across multiple genomes (as opposed to simple pairwise comparisons) while taking advantage of the increasingly multi-core and distributed computational environments available to researchers.

The approach models a collection of reads from multiple genomes as multiple stochastic processes.

In the future, we plan to extend C-Sibelia to compare multiple genomes or draft assemblies as well as scale the software to larger genomes.

The variability in genomes with nearly identical 16S ribosomal sequences was a considerable surprise when, for example, the genome of E. coli O157 was sequenced and compared to that of E. coli K12 [ 3], but has become recognized as a common phenomenon as multiple genomes from genera such as Escherichia[ 4], Salmonella[ 5], Streptococcus[ 6], Yersinia[ 7] and Sphingobium[ 8] have been compared.

Domains in a genome or multiple genomes are modeled as a network of hetero-duplex covalent linkages, termed bigrams.

SNPs were derived from the multiple genome alignment as described above and used as input for phylogenetic analysis.

Moreover, while M. depressus and P. japonicus contain single sets of WSSV-like genes in their genomes, P. monodon unambiguously shows signs of multiple genome integration events as already pointed out by Huang and co-authors [ 18].

However, multiple lineages exhibit extensively rearranged plastid genomes as well as increased rates of nucleotide substitution and elevated dN/dS ratios for some genes [ 3].

As multiple genomes of the same species are sequenced, one can construct the pan-genome, and begin to compare pan-genomes from different species.

Chaining procedures are widely utilized to define genomic intervals that are consistently ordered and oriented in multiple genomes and are often labeled as syntenic (Bourque et al., 2004; Dewey, 2007; Dubchak et al., 2009; Kent et al., 2003; Paten et al., 2008; Pevzner and Tesler, 2003).