Sentence examples for multiple genomes and from inspiring English sources

Chaining procedures are widely utilized to define genomic intervals that are consistently ordered and oriented in multiple genomes and are often labeled as syntenic (Bourque et al., 2004; Dewey, 2007; Dubchak et al., 2009; Kent et al., 2003; Paten et al., 2008; Pevzner and Tesler, 2003).

We predicted regulatory elements using three criteria: density of potential transcription factor binding sites (TFBS), sequence conservation across multiple genomes, and stretches of sequences with perfect conservation in human, mouse, and rat reference genomes.

It is worth noting that our miRNA filter depends on the folding of MCE cognates from multiple genomes and; therefore, is more stringent than the direct folding filter that we applied to confirmed miRNA, which relies on flanking sequence from one organism only.

If M << N, some clusters would contain reads from multiple genomes and precision would be low.

With the completion of multiple genomes and increasingly good annotation, the primary sequence of almost any protein can be found in the databases.

tasuke helps bioinformatics researchers of genome-wide resequencing projects to visualize a large amount of polymorphisms on multiple genomes and to release the data to the public.

Typing markers were found by multiple genome and gene comparisons, from which 23 canonical single nucleotide polymorphisms (canSNPs) and 11 canonical insertion-deletion mutations (canINDELs) were selected to provide phylogenetic guidelines for classification from genus to isolate level.

Sauropsid Kiss and KissR genes were predicted from multiple genome and transcriptome databases by TBLASTN.

Applying genetic and genomic methods to recent polyploids poses extra challenges due to the presence of multiple genome and gene copies; this can complicate short-read alignment and de novo assembly of genomes, but can also be useful in establishing patterns of relatedness among species and populations (Griffin et al. 2011).

In particular, lager brewing yeast provides an excellent case to understand whole genome duplication and multiple genomes evolution and organization.

Thus we confine the scope of Murasaki to that of anchor search on multiple genomes only, and leave the question of what to do with anchors to other tools further down the toolchain.