Sentence examples for multiple genome positions from inspiring English sources

Since, the analyzed reads were relatively short and we allowed mismatches, a large number aligned to multiple genome positions (green part Figure 1).

Known and as yet undetected QTLs are a valuable method to identify DNA markers, often in multiple genome positions, that can be used to select for improved feedstock varieties before a crop development cycle is complete.

Furthermore, reads mapped to multiple genome positions are at first uniformly assigned to each position and then expression levels are re-estimated by probabilistically dividing reads on the basis of the first abundance estimation, the inferred fragment length and the fragment bias (multi reads correction).

The remaining 21.13% do not satisfy the stringent automatic analysis parameters, either because of a low number of read starts or a stepwise coverage increase over multiple neighboring genome positions in this dataset.

We wrote a PERL program, PolyMFind, to parse this multiple genome alignment and scan for aligned positions with a SNP, a gap, or an "N" (nucleotide inserted between contigs to stitch them together).

Since we retrieve all 'best' mapping positions, reads mapping equally well to multiple genome sites may be artificially differentiated by score based on the matching of the 5′ end color.

Extended orthologous exons associated with the same multiple genome alignment block frequently contain identical conserved oligonucleotides at certain positions relative to SSs, especially within exons.

TFLOC uses a position-specific scoring matrix (PSSM) algorithm to identify putative TFBSs across multiple genome alignment files through the generation of a similarity matrix score for each putative position [5].

For short-read resequencing data, the depth of read coverage at different positions in the reference genome is fit well by an overdispersed Poisson (negative binomial) distribution [ 29]. breseq fits this distribution using unique-only reference genome positions (those not matched by any read that maps to multiple reference locations equally well).

Positions with a quality score of < 40 were cross-referenced to the multiple genome alignment, corrected where possible, or changed to an "N".

The genome positions of genes not found in the reference genome (Oryza sativa L. ssp. japonica cv.