Sentence examples for multiple genome comparisons from inspiring English sources

For multiple genome comparisons, a guide tree is used to determine the alignment order.

To test the scalability of Murasaki for full multiple genome comparisons, we repeated the comparison to existing methods test on eight mammals (human, mouse, rat, chimp, rhesus, orangutan, dog, and cow), however this time using the whole genome rather than just the X chromosomes.

Some of the mentioned programs are theoretically capable to perform multiple genome comparisons [13], [15], [20], but in practice they exceed acceptable costs in terms of memory and computation time as soon as they are confronted with a large number of vertebrate genomes.

Our multiple genome comparisons revealed that there were numerous insertions and deletions but no significant rearrangements.

Multiple genome comparisons were performed using the 'progressive alignment' option available in the program MAUVE version 2.3.0.

For visualizing multiple genome comparisons, SyntenyMiner (http://syntenyminer.sourceforge.net/) was also used to visualize orthologous gene clusters among the organisms.

Additionally, our method is highly scalable, allowing whole computer clusters to be fully utilized for large-scale multiple genome comparison.

Currently, many H. pylori genome sequences are available, which facilitate the determination of inversion borders on the basis of multiple genome comparison.

Previous approach for multiple genome comparison have been shown to perform well on a number of bacterial genomes [13], [14], but they are not specifically designed for vertebrates.

This multiple genome comparison, the first such comparison in phytopathogenic bacteria as far as we know, may provide a resource for future investigation into the virulence, host specificity and classification of pseudomonads.

An example of a multiple genome comparison tool is GenColors from Jena Prokaryotic Genome Viewer (JPGV) [ 81].