Sentence examples for multiple gene names from inspiring English sources
We also removed the false positive cases arising from splice variants of single gene loci with multiple gene names (see Figure S2 for an example).
A protein often has multiple gene names, some of which may not be included in the input PPI data file.
Enhancements, such as multiple gene name searches and local storage of GBrowse images, are being developed for future releases of YeastGenome.
CBS functions can be interrogated using multiple equivalent gene name nomenclatures from distinct sources, such as FlyBase, RefSeq, NCBI Entrez, Gene symbol names, and CG codes.
A selected set of gene name taggers with different precision-recall properties could be put together to create an effective multiple strategy to identify gene names in text.
Problems are encountered when mining genome databases Ensembl, MGI and NCBI since there are multiple references to individual gene names, making it difficult to identify the actual annotated gene on the reference sequence.
We have developed the Repository of Antibiotic resistance Cassettes (RAC) website to provide an archive of gene cassettes that includes alternative gene names from multiple nomenclature systems and allows the community to contribute new cassettes.
Of UniProt records 77 833 (16.7%) have ambiguous abbreviations with multiple senses (k≥2); similarly, 13.2% gene names and 6.4% acid/peptide/protein names in UMLS have possible conflicts with ambiguous abbreviations (k≥2).
Besides increasing the number of annotations, comparing the annotations from multiple databases ensures that mistakes in the curation can be detected and information such as alternative gene names can be compiled from multiple sources.
Because gene names are constantly evolving, multiple annotation tables are searched for relevant information on the input term.
If one phenotype from one reference is applicable to multiple genes, the curator may enter additional gene names, and the phenotype-reference combination will be associated with all the genes.
