We found multiple evolutionary and geographic origins in the plant-associated species S. schenckii s. str.
In this study, we present multiple evolutionary and phylogenetic analyses of the cA-SRs by mining publicly available genomes for these receptors.
Patterns are evaluated at multiple evolutionary and temporal scales, with mtDNA sequences revealing historical context (glacial refugium origins and taxonomic relationships) and μsat loci addressing contemporary microevolutionary processes (migration, gene flow, and genetic drift) [ 50, 51].
While adequate for human interpretation, free text strings are seldom unambiguous and are semantically opaque to computers, precluding computational comparison of phenotype data across multiple evolutionary studies and the integration of these data with other biological knowledge on the web.
Gains of more than one copy may have involved multiple evolutionary events and the critical gene may reside at the highest peak in copy number, as demonstrated for oncogenes CYP24 and ZNF217 in breast cancer [101].
As we discussed in this article, the species was usually seen as the durable unit driving branching at all levels, but the existence of multiple evolutionary levels and mechanisms violates this assumption.
Whole genome sequencing data are revealing an ever growing number of cases where all four processes are active (e.g., Andersson, 2009; Serres et al., 2009; Zhaxybayeva and Doolittle, 2011), leading to calls for algorithms that model multiple evolutionary processes (Degnan and Rosenberg, 2009; Edwards, 2009).
Finally, miRNAs are considered one of the largest gene families [2], [32], [33] and are dictated by individual as well as interactive effects of multiple evolutionary forces from genes and environments during evolutionary fluctuation history, such as mutation, recombination, duplication, and random genetic drift.
The invasion of a predator makes multiple evolutionary community histories possible, and the evolutionary history followed can determine both the invasion success of the predator into the native community and the fate of the community.
Phylogenetic analyses revealed that multiple evolutionary transitions between isometry and allometry of foot webbing have occurred in this lineage.
In order to learn the trajectory by which kinase specificity at the +1 position evolved, we reconstructed ancestral kinases within the CMGC group at multiple evolutionary time points before and after the +1 specificity change from proline to arginine was presumed to have occurred.
