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The subtractive hybridization using the mGenomeSubtractor program [ 12] was applied to run BLAST searches of the A. amazonense genome against multiple bacterial genomes for in silico comparative genomic analyses in order to characterize the unique sequences of A. amazonense.
SOLiD sequencing of multiple bacterial genomes of V. vulnificus and subsequent comparative genomic analysis identified numerous genes that are common to the most virulent strains yet lacking from attenuated strains for which genomic DNA sequence data are available.
Evoprinter functions as a tool for the rapid discovery of unique DNA sequence differences among multiple bacterial genomes and their MGEs.
As a newly developed tool for comparative genomic analysis, mGenomeSubtractor is able to run BLAST searches of the reference genome against multiple bacterial genomes (up to 30 user-selected or 10 user-supplied genomes) [72].
Advances in sequencing technology now allow modern researchers to rapidly sequence multiple bacterial genomes.
Key Points Advances in sequencing technology now allow modern researchers to rapidly sequence multiple bacterial genomes.
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A search through the database of genomic islands predicted in multiple completely sequenced bacterial genomes revealed a compositional similarity of genomic islands found in Thermus species to a broad group of mobile genetic elements discovered in Deinococcus, Actinobacteria and some other bacterial taxa.
With multiple strains of various pathogens being sequenced, it is necessary to develop high-throughput methods that can simultaneously process multiple bacterial or viral genomes to find common fingerprints as well as fingerprints that are unique to each individual genome.
In contrast with DnaK, the J-proteins are encoded in multiple copies in bacterial genomes [ 9].
However, when multiple bacterial and archaeal genomes were sequenced, it became obvious that many of them contained multiple, diverse TA loci [ 3- 5, 12, 13].
Comparative genomic analysis using in silico subtractive hybridization allowed searching for specific proteins of the A. amazonense genome against multiple closely related bacterial genomes.
More suggestions(15)
numerous bacterial genomes
multiple bacterial activities
multiple bacterial infections
multiple bacterial pathogens
multiple bacterial isolates
multiple bacterial spores
multiple related genomes
multiple bacterial aetiologies
multiple bacterial orders
multiple bacterial characteristics
multiple bacterial symbionts
multiple bacterial proteins
multiple bacterial subpopulations
multiple other genomes
multiple bacterial conditions
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