Sentence examples for multiple assembly programs from inspiring English sources

Therefore, we adapted the strategy of Kumar and Blaxter [ 26] for assembling transcriptome data using multiple assembly programs and combining the outcomes to create longer contigs that are less likely to be in-silico artefacts brought forth by a single algorithm.

Our Meta-Assembly strategy adopts a bi-level integrative approach that leverages the different and complementary results provided by multiple assembly programs over and above the integration of complementary data types to obtain a complete, whole-genome assembly.

We view our result as the demonstration of general a strategy for assembling genomes, wherein multiple data types are integrated at specific steps in the process to maximize the potential of their complementary nature and wherein multiple assembly programs are utilized such that deficiencies in one algorithmic approach are compensated by the strengths of another algorithmic approach.

Consensus sequences created by multiple assembly programs and merged by CAP3 were used to generate the Sce_Assembly03.

A significant effort was made to utilize multiple assembly programs and bioinformatics approaches for cross validation of findings and to achieve reliable assemblies of Tr. anilis and T e. subulata venom duct transcriptomes to obtain a reliable portrait of Terebridae venom.

Results: We evaluated the ability of multiple genome assembly programs to assemble bacterial genomes from a single, deep-coverage library.

Because many assembly programs can support multiple k-mer assembly after the addition of custom scripts, we compared the performance of four different assembly programs: Abyss, Newbler, Trinity and Velvet-Oasis, using a previously described protocol (Additional file 1: Table S1) [ 26, 27, 40, 45– 45].

To our knowledge, Newbler v2.3 and higher are the only assembly programs that address alternative splicing and can output multiple isoforms per gene.

T. biloba sequence reads from multiple life stages were pooled and assembled with a k-mer length of 25 using each of the four assembly programs (Table  1).

How do I develop assembly programs?

Isang of its marvels with my classmates at assembly programs.