Sentence examples for multiple assemblies and from inspiring English sources

Assembling the full transcript required contigs from multiple assemblies, and only a subset of the individual assemblies contained sequences fragments for the middle of the transcript.

Multiple assemblies and annotations of the bovine genome exist from different sources (e.g. Ensembl, NCBI, UCSC, UMD).

The assemblies generated with k-mer lengths of 23, 25, 27, and 29 base pairs were combined through meta-assembly which extends contigs found in multiple assemblies and retains contigs found in only one.

Therefore, we adapted the strategy of Kumar and Blaxter [ 26] for assembling transcriptome data using multiple assembly programs and combining the outcomes to create longer contigs that are less likely to be in-silico artefacts brought forth by a single algorithm.

The quality filtered sequence reads were assembled using the GS de novo sequence assembler v.2.5.3 (Roche 454 Life Sciences, Branford, CT, USA) and multiple assemblies were performed with modified parameters (i.e. adjusting minimum overlap length).

The final structure was watertight, rigid and sufficiently durable to withstand multiple assembly, transport and scanning protocols.

The pipeline is capable of enhanced or manually assisted reference-based assembly using multiple assemblers and modes; gene predictor combining; and functional annotation of genes and gene products.

A significant effort was made to utilize multiple assembly programs and bioinformatics approaches for cross validation of findings and to achieve reliable assemblies of Tr. anilis and T e. subulata venom duct transcriptomes to obtain a reliable portrait of Terebridae venom.

We used the subtractive multiple- k method of Surget-Groba and Montoya-Burgos (2010) and constructed multiple assemblies using a range of k-mer lengths (25, 29, 33, 37, 41, 45, 49, 53, 57, 61, 65, and 69).

Consensus sequences created by multiple assembly programs and merged by CAP3 were used to generate the Sce_Assembly03.

Because each predicted transcript may comprise multiple assembly products and multiple predicted isoforms may exist for a transcript as discussed below (see 'Treatment of putative paralogs, isoforms and singletons' section), only the top 50 results of the D. melanogaster proteome against assembly product query were retained.