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Registering genes in CGSNL's database will facilitate the cross-referencing of genes among the multiple annotation systems and also between alleles and sequence variants.
Annotation of the rhesus GeneChip® is under continuous revision with large percentages of probesets under multiple annotation systems having undergone multiple reassignments between March 2007 and November 2008.
Unlike many annotation tools, dbWFA makes it possible to query multiple annotation systems simultaneously.
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The web implementation of dbWFA provides an easy-to-use interface to annotate transcript sequences from T. aestivum, with functional information from multiple pervasive annotation systems.
Even though the complexity of the transcriptome cannot yet be fully appreciated, we developed a tool to easily and promptly obtain information from multiple functional annotation systems (Gene Ontology, MapMan bin codes, MIPS Functional Categories, PlantCyc pathway reactions and TAIR gene families).
AFAT provides an integrated data-mining environment for algal genomics by integrating multiple annotation databases into a centralized system.
To help users manage multiple annotation projects in PubTator, we developed a new document management system by which a user can create a document collection for each project and use a different annotation environment for each collection.
These general requirements were our main interest in developing an annotation interface because most curation systems currently available solve very specific problems and few of them can be used for multiple annotation tasks (14 16).
The distance measure defined here has a theoretical minimum of 0; however, this value will not be the true lower bound for most annotation systems, as even having 1 protein with 2 different annotations (perhaps due to its being composed of multiple non-overlapping domains) will not allow the H (K | C f ) term to go to 0, for any partition of the proteins.
This paper discusses annotation in an educational context and introduces some of the web annotation systems currently available.
Applying Web 2.0 collaborative annotation systems and analyzing students' annotation behavior has attracted attention to improve collaborative learning.
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