Sentence examples for multiple alignment information from inspiring English sources

Finally, structural and functional annotations (including known domains from the Interpro database: www.ebi.ac.uk/interpro/) were added using the multiple alignment information management system (MACSIMS) [58].

We used this structure together with multiple alignment information to predict a structure of the conserved region of CENP-V containing the Gfa domain (amino acids 126 260).

I have used the tree and multiple alignment information to give provisional names to as many Syts as possible (Table 1).

As template-based methods are most efficient for protein 3D structure modeling, combining multiple threading alignment information should increase the accuracy and reliability of computational domain predictions.

Whereas tools such as SIFT, PolyPhen, and Align-GD Adzhubei et al., 2010; Ng and Henikoff, 2006; Tavtigian et al., 2006 cannot score regions lacking multiple sequence alignment information, VAAST 2.0 suffers from no such limitation.

The two functional classes of plant acyl-ACP thioesterases (unsaturated fatty acid-recognizing Fat A versus saturated fatty acid-recognizing FatB) are well-defined in phylogenetic trees constructed from multiple sequence alignment information (the.msf file is provided [see Additional file 1]).

The validity of these predictions was further enhanced by comparison, based on multiple alignment and structural information, to published orthologous counterparts.

To what extent can inter-residue contact predictions from multiple sequence alignments, information which is orthogonal to that used in most structure prediction algorithms, be used to identify those models most similar to the native protein structure?

Partial protein trypsin digestions can be evaluated based on multiple peptide to protein alignment information presented in the database.

Few clades were supported by the majority of alignment blocks, indicating that combining information from multiple alignment blocks for inference in BUCKy does little to increase support for clades, especially those that are basal.

According to the protein conservation information from multiple alignment of the ppk family, we rendered a general Drosophila PPK model.