Sentence examples for multiple alignment contained from inspiring English sources
The multiple alignment contained 66 sites with alignment gaps.
Each line of the multiple alignment contained a distinct set of contigs spanning the maximum possible number of nucleotide positions of the reference sequence.
We used both a multiple alignment containing the whole protein sequences and a multiple alignment containing only the regions with unequivocal alignment.
The multiple alignment containing the ant trnNs and their homologous counterparts exhibited a high level of conservation.
Secondly, the conservation pattern of those detected sORFs was investigated by means of the UCSC multiple alignment containing 29 vertebrate genomes for Mus musculus[ 44].
To obtain multiple alignments containing the porcine conreads, we realigned the pig sequences to corresponding UCSC alignments by clustalw [ 71].
By focusing on multiple alignments containing sequences only from cattle, human and dog, we were able to investigate 7764 locations that had homology among three species as opposed to only 1335 locations if we included alignments that contained sequences from all five species.
The alignment of partial gene sequences results in a multiple sequence alignment containing large gaps that are arranged in a staggered pattern.
A multiple sequence alignment containing 30 sequences (16 trypanosomatid and 14 bacterial) was used to create a phylogenetic tree using PhyML.
To select the regions for amplification, we started from a multiple sequence alignment containing putative polymorphic sites, and identified regions in the alignment that correspond to blocks of conserved sequence (100% identity, devoid of indels and putative SNPs).
To analyze the rMSs in more detail, we prepared and characterized a protein multiple sequence alignment containing CHK2 sequences from seven mammals, three additional vertebrates, two additional deuterostomates and one protostomate.
