Sentence examples for multiple alignment analyses from inspiring English sources

Multiple alignment analyses were performed using MUSCLE (version 3.6) program [ 85].

The conservative motifs among AP2/ERF proteins in plants were clarified by performing multiple alignment analyses using amino acid sequences of the AP2/ERF domain.

The conservative motifs among AP2/ERF proteins in plants were clarified by conducting multiple alignment analyses using amino acid sequences of the AP2/ERF domain.

To analyze the sequence of the 75 typical identified BdMAPKKKs, 12 MAPKKs and 16 MAPKs, we performed multiple alignment analyses of the kinase domains, sequence by ClustalW (www.ebi.ac.uk/clustalw/).ac.uk/clustalw/

A multiple alignment analyses of the three distinct clades (clades 1-3 Figureigure 2) showed the level of conservation among contigs, as can be observed in Figure 3. Clade 1, formed by contigs from SGFRm showed the greatest degree of conservation.

Furthermore, to avoid confusion, we used the same numbering system as Tripathi et al. To analyse the sequence of the 86 typical identified B. distachyon WRKY proteins, we performed multiple alignment analyses of the WRKY domains sequence by ClustalW (www.ebi.ac.uk/clustalw/).ac.uk/clustalw/

Multiple sequence alignment analyses were performed using ClustalX (version 1.83) program.

To determine the homologous features that influenced the clustering patterns, sequences of each clade were subjected to multiple sequence alignment analyses.

However, multiple sequence alignment analyses can only provide an illustration of the degree of evolutionary conservation of an amino acid; they cannot predict with certainty the consequences of specific missense variations [ 26].

There is inherently high homology between the various trypsin proteins, but multiple sequence alignment analyses (see online supplementary appendix figure S3) clearly show that there were data specific to each of the three gene products and also that autolytic fragments of the employed porcine trypsin sequencing proteinase did not contribute any spurious result.

Multiple sequence alignment analyses are based largely on the assumptions that evolutionarily-conserved amino acids are more likely to be functionally important than nonconserved amino acids and substitutions involving chemically similar amino acids are less likely to be damaging than substitutions involving chemically different amino acids.