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Gene order rearrangements within Myctophidae provide a unique example of the phylogenetic utility of mt gene orders and the problems associated with this group of markers.
Shared mt gene orders may be useful for phylogenetic inference particularly at higher taxonomic levels [ 56].
Uda et al. (2011) suggest two possible mechanisms by which the japonicum and konojoi mt gene orders arose.
These results indicate that mt gene orders seem less useful for deduction of phylogenetic relationships between superorders within the Acari.
In light of the current results, we presume that mt gene orders with duplications were common in all ardeid birds, or at least in Ardeinae and Botaurinae subfamilies.
The assumption that Octocorallia and Medusozoa retain shared ancestral character states implies that mt gene orders have remained relatively static in both groups since their divergence.
Similar(39)
A duplication/loss (random and nonrandom) and recombination model may result in their mt gene order.
Badger v.1.02 [ 29] was used to infer the phylogeny of Sphaeropleales from mt gene order.
The mt gene order of L. digitalis is very distinctive compared to those other mollusk mt genomes sequenced so far.
Although mitochondrial (mt) gene order is highly conserved among vertebrates, widespread gene rearrangements occur in anurans, especially in neobatrachians.
On the other hand, the mt gene order in the six Asian Crassostrea oysters is completely identical to each other.
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