Several research groups have created genetically engineered animal models, particularly models of the mouse, rat, fly, and worm, which have allowed us to better, understand the initiating events of AD progression.
2) The homology group data among human, mouse, rat, fly, and worm were analyzed to remove those in conflict with MGI data.
3) The whole genome pairwise sequence similarity data from Ensembl were processed to identify reciprocal best hits as candidate orthologs for all pairwise organisms among human, mouse, rat, fly, worm, and yeast.
The platform applies to human, mouse, rat, fly, worm and zebrafish.
PhosphoSitePlus annotates orthologous modification sites between a several organisms including human, mouse, rat, fly and cow [ 4, 20].
We obtained 162 349 protein sequences annotated by ENSEMBL for human, mouse, rat, fly, worm and yeast (Birney et al., 2006).
Gemma currently focuses on a set of selected species: human, mouse, rat, zebrafish, fly, worm, and yeast.
The user must select one of the six supported organisms covering human, mouse, rat, worm, fly and zebrafish.
ChIPseek supports 20 different genome assemblies for 12 model organisms including human, mouse, rat, worm, fly, frog, zebrafish, chicken, yeast, fission yeast, Arabidopsis, and rice.
Recently a new database named COMPARTMENTS was developed for seven model organisms including yeast, Arabidopsis, human, mouse, rat, fruit fly and Caenorhabditis elegans (http://compartments.jensenlab.org) (43).
Sin1 genomic sequences from human, mouse, rat, fruit fly, mosquito, C. elegans, S. pombe, and S. cerevisiae, were retrieved from at NCBI Genome databases [ 18].
