Sentence examples for mouse brain dataset from inspiring English sources
Two are real experimental data collected at APS beamlines: a mouse brain dataset [44] and a shale sample [46].
Figure 6 shows how execution times for the mouse brain dataset scale with different numbers of compute nodes when using the ppn2-t6 configuration.
The mouse brain dataset is a large tomography dataset that consists of 4501 projections, 22,400 sinograms, and 22,400 columns, which requires (sim 4.2 TB disk space.
Since the mouse brain dataset consists of 22,400 sinograms, iterative reconstruction with a single core is not feasible, especially considering that many of iterations are needed for high-quality 3D images.
To determine whether the mouse brain dataset predicts the cell type distribution of these genes in the human brain, we performed microarray analysis of isolated neurons, astrocytes, and microglial cells derived from primary human cortical cultures, as previously described [16].
When we analyzed the expression levels of those potential map partners in the original mouse brain injury dataset, we found that several of these genes for instance, Bcr, Unc13b, IL3, and Pip5k1c were either expressed at very low levels or unexpressed.
Mouse brain development microarray expression datasets were used for this analysis.
The input dataset of mouse brain images were contributed by the Allen Institute for Brain Science and other research organizations using a standardized protocol.
All of the datasets were from mouse brain tissue samples hybridized to Affymetrix Mouse 430.2 chips.
Mouse gene list of high expression levels (top 20%, gene set 1) and that of low expression levels (bottom 20%, gene set 2) were selected according to RNAseq data from the mouse brain (Mortazavi et al., 2008) (Supplementary Dataset 2), and were fed to MamPhEA to find differential enrichment of the customized phenotype 'essentiality'essentiality
To further investigate the transcriptome dynamics and to better understand the possible roles of unannotated TARs in early neural development, we have analyzed the RNA-seq datasets from embryonic and postnatal mouse brain cortices that we generated recently [ 9], as well as seven additional RNA-seq datasets covering both neural and non-neural tissues [ 7, 18].
