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The widefield mosaic algorithm from Section 4 was executed on the motion corrected SVPs from the GCL + IPL.
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Once all g n x,y) had been registered, the final reference image yielded the motion corrected SVP of the retinal vasculature.
Functional data were motion corrected offline with the Siemens motion correction protocol.
Image time series were motion corrected in 2D using fast non-rigid motion correction (NoRMCorre)59.
Images were then motion corrected across all runs using B-Spline interpolation.
Functional data were corrected for slice-timing offsets using AFNI (afni.nimh.nih.gov/afni) and motion corrected using AIR (bishopw.loni.ucla.edu/AIR5).ucla.edu/AIR5
The images were de-spiked and motion corrected using AFNI [30].
The high speed repeated volumes were not motion corrected.
Functional data were slice-time and motion corrected.
After optimization, the motion estimates are used to construct registered and motion corrected volumes.
Motion corrected volumes do not show visible motion artifacts and a merged registered volume has improved signal quality.
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