Sentence examples for motifs were evaluated from inspiring English sources

We enumerated the motifs that occur in multiple members of the positive learning set (via the pattern identification algorithm Teiresias [43]), specifically within regions of the protein sequences that were predicted to be exposed (according to ACCpro 4.0 [44]), and these motifs were evaluated for inclusion in a Ste20p substrate predictor.

For this purpose only flexible-length motifs were evaluated.

These putative motifs were evaluated by a phylogenetic footprinting framework utilizing 39 Clostridium genome sequences available in public databases.

Here, the directional relationships among several functional motifs were evaluated using the Log-linear Graphical Model (LGM) after extraction and search for evolutionarily conserved motifs.

For all miRNA families with at least 50 unique CLASH interactions remaining, enriched motifs were evaluated using MEME version 4.9.0 (parameters '-p 100 -dna -mod zoops -nmotifs 10 -minw 4 -maxw 8 -maxsize 1,000,000,000') (Bailey and Elkan, 1994).

The ability of the computational model to predict the arrangement of particular structural motifs was evaluated by analyzing the HS chains for the presence of structures associated with elastase inhibition.

Specific localization of the motifs was evaluated by scanning for each motif in the core ± 100.

Their ability to rank three types of deterministic motifs was evaluated.

In this first experiment, the ability of the introduced measures in ranking the three different types of motifs is evaluated.

Furthermore, the biological relevance of the network motifs was evaluated by annotating the Pfam domains to their respective biological processes.

That is why, we conclude that the actual motif discovery strategy does have a major effect as long as motifs are evaluated by conservation and expression data.