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Because other standard SDR motifs are missing, plant P5ßR proteins represent a distinct SDR class (Thorn et al. 2008).
It is unlikely these motifs are missing or are altered in the promoter regions of the IsoClark genome.
By sequence analysis, MAX-2 is Group A-like, but stereotypical Group A Pak sequence motifs are missing, notably the PXXP SH2 domain recognition motifs and the PIX binding domain (Lucanic et al. 2006).
This lack of significance could be explained by the fact that PPARA motifs are missing in the JASPAR database, which retrieved higher significant results for the complex PPARG RXRA transcription factor motif.
S. pombe sib1 (Type III) is the only representative of its class; the second complete modulehas a degenerate A domain in which many of the signature motifs are missing [ 6] and an internal T-C unit after the first complete A-T-C module.
Similar(55)
NBS sub-classes contained specific signature motifs between conserved regions, and in some instances, RNBS motifs were missing or duplicated.
In a few cases, family-specific motifs were missing, but the sequences were otherwise identical or highly similar to members of the family.
RNases 13 15 are known as noncanonical RNases because the catalytic triad and/or the signature motif are missing and perhaps do not have ribonucleolytic activities.
While the RING domain and the C-terminal C3H zinc finger are found in all Mkrn4 sequences, the third C3H zinc finger and the CysHis motif are missing and have been probably lost in the ancestral mkrn4 gene early after duplication.
The best motif discovery program thus far was shown to be only 17.4% accurate, in E.coli, with many known motifs being missed [ 13].
The Dc motif was missing one basic residue form the standard docking motifs, while the Dd motif was missing the hydrophobic portion.
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