Sentence examples for motif width was from inspiring English sources
The median motif width was 17 bp.
Motif width was chosen to be 12 bp each time.
Optimum motif width was set to ≥6 and ≤50.
The mean motif width was 16bp, ranging from 10 to 21bp.
Motif width was capped at 20 bp and selected the top twenty motifs from each MEME run.
The maximum number of motifs was set to 10 and the optimum motif width was 6 to 50.
Automatically determining the width of a novel TFBS motif is a desirable property for motif discovery algorithms since the true motif width is generally not known a priori.
This means that, even if the true motif width were known in advance, a motif discovery algorithm is not guaranteed to discover this motif perfectly.
We compare MITSU against MEME and assume that the true motif width is known; both algorithms are run at this width.
These results illustrate the fact that the core motif discovery algorithm is far from perfect: even when the true motif width is known, classification-based results may be low.
The default value of motif widths was also modified and re-set between 25 and 50.
