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The sequences surrounding the PP1 docking motif were highly conserved throughout all BLAST derived taperin and phostensin sequences.

Meanwhile, the sequences in the T-loop motif were highly conserved in Arabidopsis, rice and cucumber (Additional file 5).

Many genes with a CPFL or RR2 motif were highly expressed in the third instar (mimetic pattern) although stage specificity was not completely associated with this motif, as we reported previously [ 15].

Although the frequency and variety of STR motif were highly conserved even between avian and mammalian promoters, chicken promoters had the least similarity with the entire chicken genome in terms of STR motif frequency.

The majority of LEA genes (32 out of 42) containing an ABRE motif were highly inducible (> 3-fold) by ABA, but only 12 out of the 35 genes that have an LTRE element in their -2000 nt region were highly inducible by either cold or drought in our experiments.

Also, the DCEp1 motif was highly co-localized with the TATA-box motif of genes upregulated by Fe deficiency (Figure 3G, H).

Amino acid sequences of both the homeobox domain and WUS box motif are highly conserved in dep and in the WUSCHEL HOMEOBOX (WOX) 3 orthologues in Arabidopsis thaliana, maize (Zea mays) and sorghum (Sorghum bicolor) (Figure5b).

This motif is highly conserved and can be considered invariant.

A characteristic PUF-binding motif was highly enriched among PUM bound messages and validated with RNA pull-down experiments.

Of these, only the CREB and TCF motifs were completely conserved across all six species and the AhR motif was highly conserved (Fig. 4B).

In addition, the fitting of observations with the new Nanog motif is highly significant under a test using randomized motifs (Figures S3).