Sentence examples for motif type and from inspiring English sources

The properties of the microsatellite loci including the start, stop, motif units, footprint, repeat units, motif type, and whether primers can be designed are summarized in Table S7.

We classify HSEs as gapped if one or more internal 5 bp subunits score <50% of the maximum possible for their motif type, and are flanked by subunits scoring >50%.

They also indicate an important effect of motif type and possibly also chromosomal location.

All chromosome-specific SSRs were sorted by motif type and repeat length for each chromosome (Additional files 1 and 2).

To obtain such structures, gene names of; 1) same motif type, and 2) different motif types, are pairwise compared.

In addition, for convenience, all of the SSRs were sorted by motif type and repeat length for each chromosome.

Genomic location of microsatellites (i.e., their position on the genome contigs), motif types and motif iterations are given in the Additional file 1.

These unigenes were also searched for abundance, repeat motif types and pattern of distribution of SSRs in the non-redundant (NR) expressed genome of tea.

The strong dependence on motif and initial length implies that the average genome mutation rate depends on the relative frequency of the various motif types and on the distribution of allele sizes currently segregating in the population.

A subsample of 40 SSRs representing different motif types and repeat numbers were tested using the SCRI 9328 mapping parents and a range of blackcurrant germplasm and related species, gooseberry (R. grossularia L). and redcurrant (R. rubrum L).

> -wrap-foot> Four hundred and thirty EST-SSRs were selected from EST-SSR present in the data set to give a range of repeat units and motif types, and primers were designed to amplify them.