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OsRa (the rice bHLH motif sequence of R family) was used as the outgroup in each constructed tree.
In addition, the motif sequence of P. pygmaeus was 70%and90%0% identical to that of hRNase3 and hRNase2, respectively (Table 4).
The motif sequence of the 5′-TR is ATATTACA and that of the M-TR motifs are shown in Table 1.
We also examined the binding selectivities of these proteins toward SGTP and GTP, which allowed for the revelation of the relative binding affinities of the two nucleotides toward the nucleotide-binding motif sequence of proteins.
The motif sequence of the 3′-TR is TTTAATGT; those 3′-TR motifs that varied by a single base are 3′-TR-v1 (T G TAATGT) and 3′-TR-v2 (T A TAATGT; Figures 1 and 2).
The PPPPY motif sequence of RNF11 is identical to that of Smads 2, 3 and 7, which have been shown to bind WW domains of Smurf2 Ub ligase and mediate the ubiquitination and degradation of various target proteins (Coopman et al, 2000; Longnecker et al, 2000).
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The DBM motif sequences of human Ash2L and yeast Bre2 share 25.9% identity and 46.2% similarity.
The SSRs number of other types with di- and tri-nucleotides motifs was found almost the same, indicating there were some differences existing between Saengryeg 211 and Saengryeg 213. Figure 4 Frequency distribution of di- and tri-nucleotide repeats in motif sequences of Saengryeg 211 and Saengryeg 213 pepper varieties.
Our study found 3324 candidate STEPs lying in motif sequences of 5' non-coding introns and further mining revealed 170 with transcript evidence of intron retention.
Motif sequences of MaSODs identified by MEME tools.
(C ) Multiple sequence alignment of CM1 motif sequences of Spc72s from the subphylum Saccharomycotina.
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