Sentence examples for motif sequence information from inspiring English sources

Motif sequence information was gathered from all three programs via perl script and used to make sequence logo [ 32] images with the WebLogo script [ 43].

Second, given a list of potential motifs, we propose a new kernel that integrates information on the motif sequences with information about their co-occurrence with the aim to characterize RM.

It is interesting to note that motif 2, which has identical sequence information content to motif 3, but a less specific positioning distribution, is less well identified, indicating that both the sequence and positioning specificity can affect our ability to successfully characterize motifs.

To obtain true base-pair solution, a more advanced computational approach needs to be developed to further combine the nucleotide sequence information (motif).

For later evaluation of our frequently occurring motif combinations, we have predicted the topology state of all motifs extracted from 'TM' sequence information.

The authors used publicly available motif datasets and some other sequence information mapped on human genome as training set of SVM algorithm to predict new targets for selected TFs.

Primer sequence information, repeat motifs, amplicon sizes and polymorphism features for these 500 primers are listed in Additional file 1.

In order to clarify this discrepancy, we here present a proper classification of the p115 ARM-motifs by combining both structural and sequence information.

The first one consists in using tools developed to detect motifs in DNA that consider only sequence information.

To our knowledge, these pCRMs are the only available mammalian CRMs predicted in the entire non-coding sequences around genes based solely on sequence information and known motifs.

Second, for each structure from the list we use RNA-MoIP to insert RNA 3D motifs in the structure using the sequence information provided by ω.