Sentence examples for motif is enriched from inspiring English sources

A horizontal band of enrichment around y = 0 shows that the first motif is enriched at the peakMax, while a band of enrichment on the diagonal is the second motif's enrichment at the peakMax.

If the first motif is enriched around the peakMax there is a horizontal band of enrichment along y = 0.

If the 2nd motif is enriched around the peakMax there is a negatively sloped band of enrichment on a diagonal.

Then, using the PWM of the TF, JASPAR employs the modified Needleman-Wunsch algorithm to align the motif sequence with the target sequence in that the input sequence is scanned to check whether or not the motif is enriched.

Zeller et al. [33] found the E2F1 binding motif is enriched 16-fold in clusters of MYC-binding genes, and 37-fold within the subset of E-box containing genes.

The algorithm utilizes a hidden Markov model (HMM) to describe the probabilistic process that generates the promoter sequences, and to estimate how likely it is that any given motif is enriched in the target set.

The consensus Sox dimer motif was identified as the top enriched motif (Supplementary Fig. 3a); this motif was enriched in the peak centres (Supplementary Fig. 3b) and mapped to 45% of all Sox9 peaks (Supplementary Fig. 3c).

The YY1 motif was enriched at LINE, IAP, and MERVL TEs, as previously reported46, and ChIP-seq data for YY1 showed that YY1 was bound to IAPLTR2b (Supplementary Figure 2c).

The phastcons conservation score for the SNP locus is also shown, along with Z statistic indicating how strongly the PWM motif was enriched in sequences upstream of (C) PP-increased DEGs or (D) PP-decreased DEGs.

Because the canonical HSE is composed of 3 repeats of the 5 bp motif nGAAn we sought to determine if other orientations of this motif were enriched in the peak region relative to the local background.

The Myb motif was enriched in our p300 ChIP-seq dataset.