Sentence examples for motif generated by from inspiring English sources

The crystal structure of the decapeptide Boc-Leu-Aib-Val-Ala-Leu-Aib-Val-DAla-DLeu-Aib-OMe reveals a helical segment spanning residues 1 7 and helix termination by formation of a Schellman motif, generated by DAla(8) adopting the left-handed helical (αL) conformation.

In fact, the recovered motif is very similar to the extended ACS (EACS) described by Theis and Newlon [ 21], and also 89% similar to the motif generated by alignment of 31 previously identified, functional ACSs (see Additional file 12).

Whichever tissue is the source of the 3- O-sulfated HS, the interaction of KAL-1 with this proteoglycan(s), via the HS motif generated by hst-3.2, may mediate local cellular adhesion and result in the formation of branches.

This is because gapped motifs can be approximately represented by a PWM with uniformly distributed base frequencies in the gapped positions, and that a motif generated by the synthetic model with a purely random background is either strong enough so that it can be found by both PSO+ and GALFP, or it is so weak that neither algorithm can find it.

While the protein kinases responsible for creating 14-3-3-binding 14-3-3-binding 14-3-3-binding 14-3-3-bindingmber of cases, 14-3-3-binding sequences generally conform to the typhosphositess generared by different basophilic protein knowne A/protein kinase G/protein kinase C forily (AGC) and Ca2+/calmonlyin-dependent protein kinase (CaMK) protein kinases (5, 11).

(e ) Ire1 RNA sequence recognition motifs generated by deep-sequencing analysis of tRNA ligase-generated RNA libraries of 39 mRNA targets down-regulated twofold or more in an Ire1-dependent manner.

We compared the motifs generated by MAMA, MEME, MotifSampler and SIFT from the top 50 rice genes upregulated by Fe deficiency (Table 1, 2, Additional file 1).

Motifs from the TRANSFAC [78] and JASPAR [79] databases, and motifs generated by large-scale one-hybrid screening [20], [80] and protein-binding microarray studies [81] were scanned for enrichment in Ubx- and/or Hth-bound genomic regions.

Other options include a TEIRESIAS-style output of all motifs generated by SLiMBuild, allowing SLiMFinder to be used as a direct replacement for TEIRESIAS for other SLiM discovery tools.

Motifs generated by mfinder are identified in green color and motifs generated by fanmod are identified in orange color.

The motifs generated by Motif Sampling were ranked and separated by Kullback-Leiber distance (INCLUSIVE MotifRanking program [ 17]).