Sentence examples for motif from each from inspiring English sources

As expected, each method returned the primary or expected motif from each dataset, and the methods compared agreed relatively well for these motifs (Figures S16, S17, S18, S19).

Then, we randomly select one representative control motif from each remaining cluster.

The direction and the distance of this motif from each transcriptional start site, however, has no impact on the responsiveness of either gene to Tg treatment.

For each ChIP-ed factor, we report the name (in the JASPAR+Jolma compendium) and rank (out of 884) of the most significantly enriched motif from each of the three ChIP-ed TF families.

The sequences that had the characteristics for CID class definition or that contained known domains (PAM2, CUE, SMR, RRM, DUF1771) are presented in Additional file 2. The domain architectures for the four classes of CID proteins are presented in Fig.  1, next to the sequence logos for the PAM2 motif from each class or subclass.

Further, the database also contains information generated with the DMB algorithm that illustrates the spatial distribution of the best motifs from each of the motif families in the promoters of the TGG (LEA genes).

Please refer to the first three columns of Table S1 for the output of the mRMR analysis and the last two columns of Table S1 for the number of TF motifs from each TFBS family in the nucleosome and linker DNA sequences.

The top motifs from each classification are shown in Table  2.

Candidate motifs from each cluster were identified by CisModule or BioProspector.

Motif width was capped at 20 bp and selected the top twenty motifs from each MEME run.

The list of candidate motifs from each cluster is shown in Table 1 and Additional file 1, Table S1.