Sentence examples for motif finder program from inspiring English sources

The eight subsets of ARS corresponding to individual chromosomes were subjected to the motif finder program.

We performed 1,000 random samplings of 12 sequences in the subset of 67 ARS from the other chromosomes and submitted each of the 1,000 samples to the motif finder program.

We used Motif Finder [ 13], a program which considers the location of the motif in query sequences when searching for matches.

The Tandem Repeat Finder program identified 189 repeat motifs within the genome of L. interrogans serovar Copenhageni strain Fiocruz L1-130.

Sequence motifs in the AT-rich region were identified using the Spectral Repeat Finder program [ 98].

We further analyzed the possible existence of consensus repetitive motifs within the repetitive regions of the PCENs using the Tandem Repeats Finder program.

We thus examined the structure of the pre-mRNA from exon 15 to 21, the region including each analyzed mutation (Fig.  6b) and the effect of the mutations on splicing regulatory motifs using the Human Splicing Finder program (http://www.umd.be/HSF/) [ 9] and the ESE Finder program (http://www.rulai.cshl.edu/ESE; version 3.0).

Active Motif Finder (AMF) is a novel algorithmic tool, designed based on mutations in DNA sequences.

The TAMP finder program was used as previously reported (Brito et al, Manuscript in Preparation).

Furthermore, analysis with the Tandem Repeats Finder program [27] identified 9 tandem repeats (algorithm scores >300).

These sequences were fed into the PRIORITY motif finder, which uses a Gibbs sampling strategy [26], [27].