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The differences in the upsB-derived motif compared with MEE2 are highlighted in red.
Thus a Z-score of 4 already corresponds to p ≈ 3.2 × 10-5 and would suggest significant overrepresentation of the motif compared with the ensemble of randomized networks.
The lower enrichment of the Tal1 motif compared with Gata1 may be due to the fact that Tal1 often binds DNA as a complex with Gata, Lmo2, Ldb1 and E47 (Wadman et al., 1997).
The TLR1 family (TLR1, TLR2, TLR6, and TLR10) and the TLR4 family share a common feature, the central part of the LRR domain has a more irregular motif compared with those at the N- and C-terminal parts.
The slightly higher elongation rates mediated by Ena/VASP proteins harbouring the DdFAB motif compared with equivalent constructs with the hFAB motif could indeed be fitted with a higher kt value.
The 3′-UTR of COL2A1 contains one AUUUA motif compared with eight in the SOX9 sequence and is classed a cluster 4 AU-rich element by the ARE database ARED (4).
Similar(53)
The pseudo 3'-termini sequences had damaged "CTAG" motif comparing with the real 3'-termini.
The N-terminal region of the C2-PLDs contained 10 motifs, compared with 6 motifs in the same region of the PXPH-PLDs.
Moreover, 54 75% of known motifs were similar to the 2684 predicted motifs compared with <6% of known motifs similar to 2684 randomly generated motifs (25).
We determined the quality of individual motifs compared with the defined consensus sequences using MAST MEMEE suite version 4.3.0) on the sequences extracted from peak regions.
The central part in the LRR domains within the TLR1 family and TLR4 has more irregular motifs compared with the N- and C-terminal parts.
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