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The most used databases were MEDLINE/PUBMED and EMBASE.
The most used databases for carbohydrate active enzymes are CAZy [ 62] and Pfam [ 63].
> -wrap-foot> Among the most used databases of pathways/networks, the Kyoto Encyclopedia of Genes and Genomes (KEGG) was one of the first databases of biological signaling pathways made freely available to the general scientific community (2, 3).
By using a combination of high-accuracy mass spectrometry data acquisition, N-terminal prediction and gene annotation comparison, we were able to identify 35 tryptic peptides which were specific to one or other of the two most used databases of the M. tuberculosis H37Rv laboratory strain.
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To guarantee unbiased comparison, we perform experiments on the public Pointing'04 database [34], which is the most used database in literature for head pose estimation [14].
GenBank is the most used database to register sequences compared with the INSDC partners (DDJB) and (EMBL).
This was sufficiently difficult that it was done for only a few of the most-important and most widely used databases, and it restricted the resulting perl executable to using just one database interface at a time.
In terms of usage, the IAM handwriting database [2, 3] is one of the most widely used databases for a number of recognition tasks.
Finally, it is also worthwhile to mention that most of used databases use proprietary algorithms and do not disclose how they extract underlying knowledge.
Another article looked at several drug databases from the perspective of librarians and pharmacists, but used only ten questions in their assessment and omitted some of the most commonly used databases [ 5].
We used a two-step strategy to overcome the absence of standard data formats, even among the most widely used databases in PathGuide, and thereby compile an ensemble meta-database of inflammation-associated signal transduction networks.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com