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Most transcripts from this oomycete are found localized in the root (Fig. 2a).
The deep-sequencing capacity of both techniques assured the collection of most transcripts in the rice tissues.
Most transcripts showed specific expression pattern in root and shoot at early, middle or late stage of −P and ++P stress.
The dose-response relationship found in the kidney cortex and the kidney medulla was similar, and most transcripts were either up- or downregulated by a factor of 2 at all dose levels.
To display an overview of the microarray results, we clustered the transcripts according to fold change using R language, which revealed that the expression level of most transcripts did not change in either part 1 or part 2 (Fig. 4D).
Considering all investigated tissues, IR-associated transcripts had a mean (absolute) fold-change of 2.4 with a minimum of 1.5 and maximum of 7.2; most transcripts were down-regulated (Additional file 2: Table S2).
We also found that most transcripts whose levels were altered by in vivo manipulation of RNase H levels did not form detectable R-loops, suggesting that prolonged manipulation of R-loop levels could indirectly alter the transcriptome.
It is shown herein that most transcripts were down-regulated for both lignin and xylan synthesis pathways in these lines, while CELLULOSE SYNTHASE A3 was up-regulated in lignin-modified lines.
Third, EST data represent only partial sequences of most transcripts.
However, since most transcripts bear a canonical PUF-binding motif (see below), we believe that they represent true PUM targets.
As the total copy number per cell increases, most transcripts centre at 1 5 copies per cell.
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CEO of Professional Science Editing for Scientists @ prosciediting.com