Sentence examples for most suitable nucleotide from inspiring English sources
The most suitable nucleotide substitution model for each of the gene regions was selected in jModeltest ver. 0.1.1 (Posada [2008]) using Akaike information criterion (AIC).
Using MRMODELTEST 2.2 [ 106] we determined that the GTR model of nucleotide substitution with gamma distributed rate variation among sites and nine rate categories (GTR+Γ) was the most suitable nucleotide substitution model for our full sequence set.
As described above, we determined that the HYK+I model was the most suitable nucleotide substitution model for our 48 sequences; and using BF, we determined that the sequences were behaving in accordance with a strict molecular clock rather than a relaxed clock, and that a constant population size prior had a better fit than an exponential growth prior.
Today's nucleotides G, C, A, T, U that are based on pentoses, appear to be the most suitable nucleotides for the formation of the complementary structure consisting of two imperfect "triplets".
(i) Whole genome - The most suitable model of nucleotide evolution for the whole genome sequences was chosen using jModelTest 0.1.1 [ 40, 41] This model was coded in to MrBayes [ 42] to create a Bayesian tree, which was run with two chains for 4.1 million generations, sampling every 100 generations, and discarding 25% of the samples as burnin.
Then, the system splits these ordered tasks into Suitability Quartiles, from most suitable (SQ1) to less suitable (SQ4).
Most association studies rely on the use of surrogate markers, single-nucleotide polymorphisms (SNPs) being the most suitable due to their abundance and ease of scoring (see discussion in [35].
Hence, single nucleotide polymorphisms (SNPs) would be the most suitable marker type to cover a complex genome like that of B. napus in the required density for genome-wide association studies (GWAS).
The HKY + I + G model with 6 substitution categories was determined to be the most suitable model by Modeltest and was used for all subsequent nucleotide analyses.
The general time reversible GTR + I + G model with 6 substitution categories was determined to be the most suitable model by Modeltest v3.6 [ 83] and was used for all subsequent nucleotide analyses.
A parameterization of the CNF form that included the most general reversible nucleotide process (Lanave et al. 1984) has been established as being most suitable for the estimation of evolutionary rates within codons (Yap et al. 2010).
