Most sequences clustered equally between the two main fungal phyla Ascomycota and Basidiomycota.
The rhs genes at position 6 appear in two positions within the network: most sequences cluster with rhs from position 3, but sequences from strains K12, SE11 and Sh.
Human sequences grouped within the same 4 HEV genotype 3 clusters, with most of the sequences clustering within Dutch cluster 3c.
Most environmental sequences clustered together in a unique group with no cultured or uncultured representatives retrieved from databases (Fig. 2).
Here, most CUC3 sequences clustered together with four uncharacterized proteins from A. thaliana.
Therefore, it was concluded that the most abundant sequence cluster represented putative clones of L. ochracea.
> -wrap-foot> Figure 3 also showed that the most abundant sequence clusters obtained after one (H1) and two (H2) cycles of capture did not, for a majority of them, correspond to the most abundant clusters present before capture (H0).
Venn diagrams drawn using only these most prominent sequence clusters, encompassing altogether 90 93% of sample sequences, showed that there existed a larger overlap between the post-capture samples H1 and H2 than between the pre-capture samples H0 and H1 or H2 (Fig. 3B).
Most of the HA and NA sequences clustering closely with the Fuji/411/02 and Cal/7/04 WHO vaccine strains seem to have been isolated in Australasia (Figures S3 and S4), though this may not necessarily mean that the Fuj/411/02-like viruses originated from there.
