The most common group TGGTCC in contrast ranges from values of 71%to80%0% and is therefore probably assembled of unpaired nucleotides.
Thus, assembling U1 snRNPs most probably do not spend the same time in CBs as U2 snRNP, which contains at least 12 snRNP-specific proteins and the U2 snRNA which is modified on at least 23 places [32].
For example, of three contigs containing more than 100 clones, the largest (Ctg148, 185 clones) most probably contains a large proportion of wrongly assembled clones.
The fact that Omp85-POTRA3 is most probably integrated into the OMM and can assemble PorB but does not form oligomers indicates that Omp85 is also functional as a monomer.
The velvet and Mapssembler assemblies failed to assemble the reads around the genomic island, most probably because of the presence of highly repeated transposase sequences, clearly identified in the complete sequence.
ΔN197 mutant was less able to self-assemble than Rod, ΔPN140 and ΔN141, most probably due to its being shorter (Figure 2B).
These results most probably represent gene sequences that are still not annotated or assembled into the bovine genome, and hence were completely missed by the Ensembl orthology prediction.
130 contigs, assembled from 3949 sequence reads, contained more than 20 ESTs, most probably representing transcripts with highest abundance at this stage of heart regeneration.
Although dominantly standing on the surface of PS, hMSCs occasionally assemble on the surface of Si (see several cases in Figure 4b,c), most probably as an issue of cell to cell interactions in concurrence with cell to substrate interactions.
Interestingly, 2,262 isotigs were assembled either only by reads from BR or BS, indicating that these isotigs represent most probably genes that were present only in BR or BS.
